Browse of TCMCG009C19639 protein

CDS

Accession Number	TCMCG009C19639
gbkey	CDS
Protein Id	XP_030510278.1
Location	complement(join(52969867..52970791,52971817..52971969,52988493..52988654,52988770..52988897,52989181..52989286,52989445..52989544,52989652..52989777,52990166..52990369,52991009..52991096,52991235..52991283,52991376..52991471,52991695..52991778,52993729..52993787,52993868..52993902,52994013..52994137,52994924..52994999,53001279..53001428,53001558..53001564,53001654..53001691,53002402..53002481,53003031..53003102,53004262..53004353,53005511..53005585,53006875..53007011,53007085..53007170,53007642..53007733,53008064..53008396))
Gene	LOC115725017
GeneID	115725017
Organism	Cannabis sativa

Protein

Length	1225aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA560384
db_source	XM_030654418.1
Definition	DNA ligase 4 [Cannabis sativa]

EGGNOG-MAPPER Annotation

COG_category	L
Description	DNA ligase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	R00381        [VIEW IN KEGG]
KEGG_rclass	RC00005        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K10777        [VIEW IN KEGG]
EC	6.5.1.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko03450        [VIEW IN KEGG] map03450        [VIEW IN KEGG]
GOs	GO:0000726        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0003909        [VIEW IN EMBL-EBI] GO:0003910        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005576        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006266        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006289        [VIEW IN EMBL-EBI] GO:0006297        [VIEW IN EMBL-EBI] GO:0006302        [VIEW IN EMBL-EBI] GO:0006303        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009314        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010165        [VIEW IN EMBL-EBI] GO:0010212        [VIEW IN EMBL-EBI] GO:0016874        [VIEW IN EMBL-EBI] GO:0016886        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0032807        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048046        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051103        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0140097        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCGGAGGAAACCAAGTTCAGTGTCCTCTGCAGTCTCTTCAACTGGATGCTCAGGAGCAAAACATCTGCTAAGAAGCGTTCCAAGTTTCGGAAATTTCTTGATAACTTCTGCAAACCCGCCGATTACTTCAGCGCTGTACGACTCATCCTCCCCAATCTGGACCGCGAGCGTGGCTCCTATGGCCTCAAGGAGTCTGTTCTAGCCACTTCCCTCATCGACGCTCTCGGCATGGCTAGGGACTCCCCTGACGCTCTTCGCCTCATCAATTGGCGCAAAGGTGGCGCAAAGACTGGTGCCAATGCTGGAAACTTTGCCCTTGTTGCCGTAGAAGTACTAGAACGTAGGCAAGGAATGACGTCTGGTGGACTAACAATCAGAGAGTTAAATGAGTTGCTTGATCGTTTGGCTTCATGTGAAAACAGGTCTGAGAAGATTTCAGTTCTTGCTATGTTGATTAAGAAGACAAATGCACAAGAAATGAAGTGGATCATCATGATCATTTTAAAAGATTTGAAGTTAGGAATCAGTGAAAAAAGTATATTTCATGAATTCCATCCAGATGCAGAGGACTTGTTTAATGTCACCTGTGACTTGAAATTGGTTTGTGAAAAGCTTAGTGACCGAAGTCAACGGCATAAGCGGCAGGATATTGAAGTTGGAAAGGCAGTGCGTCCTCAACTAGCTATGAGAGTTGCCGATGCAACTGTTGCATGGAAAAAGCTTCATGGTAAGGAGGTGGTTGTTGAATGCAAATTTGATGGTGATCGCATACAAATTCATAAGAATGGAACTGAAATACACTACTTCTCGAGAAATTTTCTTGATCACTCTGAATATGGACATGCAATGTCAGACGTCATTGTGCGAAATGTTACTGCTGATAGGTGTATACTAGATGGTGAAATGTTGGTCTGGGACACATCTTTAAATCGCTTTGCTGAGTTTGGTTCAAATCAAGAAATAGCCAAGGCAGCAAGGGAAGGGTTTGATAGTGATCGACAGTTATGTTATGTTGCATTTGATATTCTTTATGTCGGCGATACTAGTGTAATTCATCAGAGCTTGAAGGAACGACACGAGCTTCTTCAAAAGATTGTAAAGCCCTTGAAGGGTCGCCTTGAATTCTTAGTACCTAATGGTGGAACTCATTATCCTCCTGGTGAAGCTTGTTGGTCGCGCATTGCTCATAATGTGGATGATGTTGAGAGATTTTTCAAGGAAACCATTGAAAATAGAGACGAAGGGATTGTTCTAAAGGATCTTGGCTCTAAATGGGAACCTAGTGATCGAAGTGGAAAGTGGTTGAAATTGAAGCCTGATTATGTTCGTGCTGGTTCGGATCTGGACGTTCTTATTGTAGGAGGATATTATGGTTCTGGACGTCGTGGAGGAGAGGTAGCTCAATTCTTGGTTGGCCTTGCAGAACGTCCTGCCCCAAATACACATCCAAGGCGATTTATTTCATTCTGCAGAGTGGGTACTGGACTCTCTGATGAGGAGTTAGATGCTGTTGTAAACAAGTTGAAGCCTTATTTCAGGAAATATGATTATCCAAAGAAAGCTCCACCAAACTTTTATCATGTCACAAACAATTCCAAAGAAAGACCAGACGTCTGGATTGACAGCCCTGAGAAATCAATTATACTTTCTATTACCAGTGACATCCGAACTATAAGGTCTGAGGTTTTTGCAGCACCATACAGCCTGAGGTTTCCACGTATTGACAGAGTTAGATACGACAAGCCTTGGCATGAATGCCTTGATGTTCAATCATTTATAGAGCTAGTACAGACTGGTAATGGCACCACTCACAAGGGTACTGATTCTGGGGGAGTGCAACAGAGTAAAAAAACTTTCACGAAGCCTTCTACAAGGAAAGGGAAAAGGAATTTGTCTGCTGTTCCTTCTCATTTAGTTCGCACAGATATTTCTGGTGTTAAGGAGGACACCTTAATATTTTCAGGCATGATGTTCTACTTTGCTAATGTGCCTCCAACTCATTCATTGGAATCCTTTCACAAAGTGATTGCTGAGAATGGGGGCACTTTCTCTATGAATCTGAACAGTTCTGTCACTCATTGTGTTGCAGCTGAAAGCAAAGGAATTAAATATCAGGCAGCAAAGCGTCAAGGGGATATTGTTCATTACTCATGGGTATTGGATTGCTGCTCTCAAAGGAAGCTTATTCCTCTACAGCCAAAGTATTACCTCTTCCTATCTGACTTTTCAAAGAAGAAATTACAAGAAGACATTGATGAATTTTCTGACACTTACTACTGGGATCTAGACCTTGCGGACATCAAACAGCTCTTAAGCAATGTGAATGGAGCACAACACACTAGAACTACTGATCATTACAAGAAAAAGCATTGGCCGCCCAAGTGGTCTTACTTCCACGATTGCTTCATCTACTTTTATGCTCCACTACAATATTTAAAACCAGATTGGGAAGTTGTGTTAGGTCTTGCACTGCGGCGGTTAAAGGTTGAAGTTCAAATGAATGGAGGGAGAGTTAGCAATAGTCTTGCTCAAGCGACCCATTTGGTTATCTTCTTTGTCCCAGGCTGTTCCCTAGACGTTGAAGATTTATTGAAAAGTTTCAATGCAATGGAAAAACGTATTCTCCGGAAGCGGACTTTACATATTGTCGAATCTCAATGGTTGGATGACTGTGCTGCAAGTGAACAAAGATTGCCAGAAGAAACATATAGCTTAAAGCATATGTTGGAGCAACAGAATGATGAAAACTGCGAATATGACATGGATTTGGAGTTGGATCCTGTGGAGAATCAGGCTTTGTCATGTTCCTCTAAAGAAGATGAAATTGATAGGAGAGACGACAATGATGCCCCGAAAAACACTGAAGTCTTGACAACACTTGAATCTAGTAGGAAACGTGGAAGATTTGCTGGCAAAAGCATAGATAAAAGGAAACCAGTACCTAAGAAAGCTCGAAGAACACGACCACATATTGGAAATAAGCCTGCTAAAATATCTGGTAATGAATCAGATAGTGTTTCTCATGAAGAAAACATATTGAAAGAAGAGAACAAACAAATGATGGAAGATGATAAGAAAAGTTCACATATTAATAAAGCAAGAGCAGGACCCAATAAAGTTCGAAGAACACGTGCACGCACTGGAAAAAGGCCTGCTAAATTATCTTGCAATGAATCAGATGATGATGTTTCTCATGAGGTAAACTCAGTCAAAGAGGAGAGCAAACAAATGGAGCAAACTCATGAACTGATTCATAAAAGTGAGAGGGTAGAAGAGCCTCAATCAGCAGTTGAACTGAAAGAGATTAAGCAAGGTGAAGAAAGTTTTAGACATGAAGAGTGGTTCAACAAAGTTCCTGAATATGAAATGACTGAGAAGTTTAGTTGTGAAAACATTCCACAGCAGAAGCTGGAAGTTCTGACTGATCCTGTTCATGCCATGTTGTTGGACATGATTCCAAGTCTTGGAAAGCCGAAAAGTGCAACTACTACTACTAATTTAAGAATTGAAGATGATAAACCACCGATGGACATAAATGCAGCACCGATTACTAGTAAATTAAGGATTGAAGATGATAAGCGGCTGATGGATGTAAATGCTGCAATGCCGCCAGCAGAGCCTAAAAGGAAGAAAGTTAGCTACAGGGATCTAGCTAGTGAGCTGCTTAAGGATTGA

Protein:   MAEETKFSVLCSLFNWMLRSKTSAKKRSKFRKFLDNFCKPADYFSAVRLILPNLDRERGSYGLKESVLATSLIDALGMARDSPDALRLINWRKGGAKTGANAGNFALVAVEVLERRQGMTSGGLTIRELNELLDRLASCENRSEKISVLAMLIKKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLSDRSQRHKRQDIEVGKAVRPQLAMRVADATVAWKKLHGKEVVVECKFDGDRIQIHKNGTEIHYFSRNFLDHSEYGHAMSDVIVRNVTADRCILDGEMLVWDTSLNRFAEFGSNQEIAKAAREGFDSDRQLCYVAFDILYVGDTSVIHQSLKERHELLQKIVKPLKGRLEFLVPNGGTHYPPGEACWSRIAHNVDDVERFFKETIENRDEGIVLKDLGSKWEPSDRSGKWLKLKPDYVRAGSDLDVLIVGGYYGSGRRGGEVAQFLVGLAERPAPNTHPRRFISFCRVGTGLSDEELDAVVNKLKPYFRKYDYPKKAPPNFYHVTNNSKERPDVWIDSPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDRVRYDKPWHECLDVQSFIELVQTGNGTTHKGTDSGGVQQSKKTFTKPSTRKGKRNLSAVPSHLVRTDISGVKEDTLIFSGMMFYFANVPPTHSLESFHKVIAENGGTFSMNLNSSVTHCVAAESKGIKYQAAKRQGDIVHYSWVLDCCSQRKLIPLQPKYYLFLSDFSKKKLQEDIDEFSDTYYWDLDLADIKQLLSNVNGAQHTRTTDHYKKKHWPPKWSYFHDCFIYFYAPLQYLKPDWEVVLGLALRRLKVEVQMNGGRVSNSLAQATHLVIFFVPGCSLDVEDLLKSFNAMEKRILRKRTLHIVESQWLDDCAASEQRLPEETYSLKHMLEQQNDENCEYDMDLELDPVENQALSCSSKEDEIDRRDDNDAPKNTEVLTTLESSRKRGRFAGKSIDKRKPVPKKARRTRPHIGNKPAKISGNESDSVSHEENILKEENKQMMEDDKKSSHINKARAGPNKVRRTRARTGKRPAKLSCNESDDDVSHEVNSVKEESKQMEQTHELIHKSERVEEPQSAVELKEIKQGEESFRHEEWFNKVPEYEMTEKFSCENIPQQKLEVLTDPVHAMLLDMIPSLGKPKSATTTTNLRIEDDKPPMDINAAPITSKLRIEDDKRLMDVNAAMPPAEPKRKKVSYRDLASELLKD